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W
A
add_filename_suffix() (imagesplit.file.tiff_file_reader.TiffFileReader static method)
anatomical_to_cosine() (in module imagesplit.file.metaio_reader)
anatomical_to_permutation() (in module imagesplit.file.metaio_reader)
Axis (class in imagesplit.image.combined_image)
B
bind_by_roi() (imagesplit.image.combined_image.SubImage method)
BlockImageFileReader (class in imagesplit.file.image_file_reader)
C
CHAR_TYPE (imagesplit.file.data_type.DataType attribute)
close() (imagesplit.file.file_wrapper.FileStreamer method)
(imagesplit.file.file_wrapper.FileWrapper method)
(imagesplit.file.metaio_reader.MetaIoFile method)
(imagesplit.file.tiff_file_reader.TiffFileReader method)
(imagesplit.file.vol_reader.VolFile method)
(imagesplit.image.combined_image.CombinedImage method)
(imagesplit.image.combined_image.LocalSource method)
(imagesplit.image.combined_image.Source method)
(imagesplit.image.combined_image.SubImage method)
close_file() (imagesplit.file.image_file_reader.BlockImageFileReader method)
(imagesplit.file.image_file_reader.LinearImageFileReader method)
(imagesplit.file.metaio_reader.MetaIoFile method)
(imagesplit.file.tiff_file_reader.TiffFileReader method)
(imagesplit.file.vol_reader.VolFile method)
CombinedImage (class in imagesplit.image.combined_image)
compute_bytes_per_voxel() (in module imagesplit.file.vol_reader)
(in module imagesplit.utils.utilities)
condensed_to_cosine() (in module imagesplit.file.metaio_reader)
convert_to_array() (in module imagesplit.utils.utilities)
convert_to_descriptors() (in module imagesplit.utils.file_descriptor)
convert_to_dict() (in module imagesplit.utils.file_descriptor)
CoordinateTransformer (class in imagesplit.image.combined_image)
coords_to_other() (imagesplit.image.image_wrapper.SmartImage method)
copy() (imagesplit.image.image_wrapper.ImageStorage method)
create_empty() (imagesplit.image.image_wrapper.ImageStorage class method)
create_file_handle() (imagesplit.file.file_wrapper.FileHandleFactory static method)
create_read_file() (imagesplit.file.file_factory.FileFactory method)
(imagesplit.file.metaio_reader.MetaIoFile class method)
(imagesplit.file.tiff_file_reader.TiffFileReader class method)
(imagesplit.file.vol_reader.VolFile static method)
create_write_file() (imagesplit.file.file_factory.FileFactory method)
(imagesplit.file.metaio_reader.MetaIoFile class method)
(imagesplit.file.tiff_file_reader.TiffFileReader static method)
D
DataType (class in imagesplit.file.data_type)
DataTypeTemplate (class in imagesplit.file.data_type)
dim_order_from_header() (in module imagesplit.file.vol_reader)
dimensions_from_orientations() (in module imagesplit.file.metaio_reader)
do_setup() (in module versioneer)
do_vcs_install() (in module versioneer)
DOUBLE_TYPE (imagesplit.file.data_type.DataType attribute)
E
extension_to_format() (imagesplit.file.format_factory.FormatFactory class method)
F
file_linear_byte_offset() (in module imagesplit.utils.utilities)
FileFactory (class in imagesplit.file.file_factory)
FileFormats (class in imagesplit.file.file_formats)
FileHandleFactory (class in imagesplit.file.file_wrapper)
FileImageDescriptor (class in imagesplit.file.file_image_descriptor)
FileStreamer (class in imagesplit.file.file_wrapper)
FileWrapper (class in imagesplit.file.file_wrapper)
flip() (imagesplit.image.image_wrapper.ImageStorage method)
FLOAT_TYPE (imagesplit.file.data_type.DataType attribute)
FormatFactory (class in imagesplit.file.format_factory)
from_condensed_format() (imagesplit.image.combined_image.Axis static method)
from_dict() (imagesplit.utils.file_descriptor.SubImageDescriptor static method)
from_metaio() (imagesplit.file.data_type.DataType class method)
from_raw_image() (imagesplit.image.image_wrapper.ImageStorage class method)
from_tiff() (imagesplit.file.data_type.DataType class method)
from_vge() (imagesplit.file.data_type.DataType class method)
G
generate_input_descriptors() (in module imagesplit.utils.file_descriptor)
generate_output_descriptors() (in module imagesplit.utils.file_descriptor)
get() (imagesplit.image.image_wrapper.ImageStorage method)
get_block_coordinate_range() (in module imagesplit.utils.utilities)
get_bytes_per_voxel() (imagesplit.file.metaio_reader.MetaIoFile method)
(imagesplit.file.vol_reader.VolFile method)
get_cmdclass() (in module versioneer)
get_condensed_dim_order() (in module imagesplit.file.metaio_reader)
get_config() (in module imagesplit.utils.versioneer_version)
get_config_from_root() (in module versioneer)
get_default_metadata() (in module imagesplit.file.metaio_reader)
get_dimension_ordering() (imagesplit.file.metaio_reader.MetaIoFile method)
(imagesplit.file.vol_reader.VolFile method)
get_extension_for_format() (imagesplit.file.format_factory.FormatFactory class method)
get_factory() (imagesplit.file.format_factory.FormatFactory class method)
get_flip_from_orientations() (in module imagesplit.file.metaio_reader)
get_handle() (imagesplit.file.file_wrapper.FileWrapper method)
get_image() (imagesplit.image.image_wrapper.ImageStorage method)
get_is_imagej() (imagesplit.file.data_type.DataType method)
get_is_rgb() (imagesplit.file.data_type.DataType method)
get_keywords() (in module imagesplit.utils.versioneer_version)
get_limits() (imagesplit.image.combined_image.CombinedImage method)
(imagesplit.image.combined_image.SubImage method)
get_local_origin() (imagesplit.utils.file_descriptor.SubImageDescriptor method)
get_local_size() (imagesplit.utils.file_descriptor.SubImageDescriptor method)
get_local_voxel_size() (imagesplit.utils.file_descriptor.SubImageDescriptor method)
get_number_of_blocks() (in module imagesplit.utils.utilities)
get_numpy_datatype() (in module imagesplit.file.vol_reader)
(in module imagesplit.utils.utilities)
get_numpy_format() (imagesplit.file.data_type.DataType method)
get_raw() (imagesplit.image.image_wrapper.ImageStorage method)
get_raw_image() (imagesplit.image.image_wrapper.ImageStorage method)
get_root() (in module versioneer)
get_size() (imagesplit.image.image_wrapper.ImageStorage method)
get_sub_image() (imagesplit.image.image_wrapper.ImageWrapper method)
get_suggested_block_size() (in module imagesplit.utils.utilities)
get_type() (imagesplit.image.image_wrapper.ImageStorage method)
get_version() (in module imagesplit.utils.versioning)
(in module versioneer)
get_version_string() (in module imagesplit.utils.versioning)
get_versions() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
git_get_keywords() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
git_pieces_from_vcs() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
git_versions_from_keywords() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
GlobalImageDescriptor (class in imagesplit.utils.file_descriptor)
H
header_from_descriptor() (in module imagesplit.utils.file_descriptor)
I
image_to_global() (imagesplit.image.combined_image.CoordinateTransformer method)
image_to_local() (imagesplit.image.combined_image.CoordinateTransformer method)
image_to_other() (imagesplit.image.combined_image.CoordinateTransformer method)
ImageFileReader (class in imagesplit.file.image_file_reader)
imagesplit (module)
imagesplit.applications (module)
imagesplit.applications.split_files (module)
imagesplit.applications.write_files (module)
imagesplit.file (module)
imagesplit.file.data_type (module)
imagesplit.file.file_factory (module)
imagesplit.file.file_formats (module)
imagesplit.file.file_image_descriptor (module)
imagesplit.file.file_wrapper (module)
imagesplit.file.format_factory (module)
imagesplit.file.image_file_reader (module)
imagesplit.file.metaio_reader (module)
imagesplit.file.tiff_file_reader (module)
imagesplit.file.vol_reader (module)
imagesplit.image (module)
imagesplit.image.combined_image (module)
imagesplit.image.image_wrapper (module)
imagesplit.utils (module)
imagesplit.utils.file_descriptor (module)
imagesplit.utils.json_reader (module)
imagesplit.utils.utilities (module)
imagesplit.utils.versioneer_version (module)
imagesplit.utils.versioning (module)
ImageStorage (class in imagesplit.image.image_wrapper)
ImageWrapper (class in imagesplit.image.image_wrapper)
ImageWrapperBase (class in imagesplit.image.image_wrapper)
L
Limits (class in imagesplit.image.combined_image)
LinearImageFileReader (class in imagesplit.file.image_file_reader)
load() (imagesplit.file.image_file_reader.BlockImageFileReader method)
(imagesplit.file.tiff_file_reader.TiffFileReader method)
load_and_parse_header() (imagesplit.file.metaio_reader.MetaIoFile class method)
(imagesplit.file.tiff_file_reader.TiffFileReader class method)
(imagesplit.file.vol_reader.VolFile class method)
load_descriptor() (in module imagesplit.utils.file_descriptor)
load_mhd_header() (in module imagesplit.file.metaio_reader)
load_vge_header() (in module imagesplit.file.vol_reader)
LocalSource (class in imagesplit.image.combined_image)
LONG_LONG_TYPE (imagesplit.file.data_type.DataType attribute)
LONG_TYPE (imagesplit.file.data_type.DataType attribute)
M
main() (in module imagesplit.applications.split_files)
METAIO_FORMAT (imagesplit.file.file_formats.FileFormats attribute)
metaio_from_name() (imagesplit.file.data_type.DataType class method)
MetaIoFile (class in imagesplit.file.metaio_reader)
mhd_cosines_to_permutation() (in module imagesplit.file.metaio_reader)
N
name_from_metaio() (imagesplit.file.data_type.DataType class method)
name_from_tiff() (imagesplit.file.data_type.DataType class method)
name_from_vge() (imagesplit.file.data_type.DataType class method)
NotThisMethod
,
[1]
O
open() (imagesplit.file.file_wrapper.FileWrapper method)
P
parse_header() (in module imagesplit.utils.file_descriptor)
parse_mhd() (in module imagesplit.file.metaio_reader)
parse_slice_output() (in module imagesplit.applications.split_files)
parse_tiff() (in module imagesplit.file.tiff_file_reader)
parse_vge() (in module imagesplit.file.vol_reader)
permutation_from_orientations() (in module imagesplit.file.metaio_reader)
permutation_to_cosine() (in module imagesplit.file.metaio_reader)
plus_or_dot() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
R
ranges_for_max_block_size() (in module imagesplit.utils.utilities)
ranges_for_number_of_blocks() (in module imagesplit.utils.utilities)
read_image() (imagesplit.file.image_file_reader.BlockImageFileReader method)
(imagesplit.file.image_file_reader.LinearImageFileReader method)
(imagesplit.image.combined_image.CombinedImage method)
(imagesplit.image.combined_image.LocalSource method)
(imagesplit.image.combined_image.Source method)
(imagesplit.image.combined_image.SubImage method)
read_image_bound_by_roi() (imagesplit.image.combined_image.SubImage method)
read_json() (in module imagesplit.utils.json_reader)
read_line() (imagesplit.file.file_wrapper.FileStreamer method)
(imagesplit.file.image_file_reader.LinearImageFileReader method)
(imagesplit.file.metaio_reader.MetaIoFile method)
(imagesplit.file.vol_reader.VolFile method)
register_vcs_handler() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
render() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
render_git_describe() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
render_git_describe_long() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
render_pep440() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
render_pep440_old() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
render_pep440_post() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
render_pep440_pre() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
rescale_image() (in module imagesplit.utils.utilities)
reshape() (imagesplit.image.image_wrapper.ImageStorage method)
RGB_TYPE (imagesplit.file.data_type.DataType attribute)
run_command() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
S
save() (imagesplit.file.image_file_reader.BlockImageFileReader method)
(imagesplit.file.tiff_file_reader.TiffFileReader method)
save_mhd_header() (in module imagesplit.file.metaio_reader)
scan_setup_py() (in module versioneer)
set() (imagesplit.image.image_wrapper.ImageStorage method)
set_sub_image() (imagesplit.image.image_wrapper.ImageWrapperBase method)
SHORT_TYPE (imagesplit.file.data_type.DataType attribute)
simplify_format() (imagesplit.file.format_factory.FormatFactory class method)
SmartImage (class in imagesplit.image.image_wrapper)
Source (class in imagesplit.image.combined_image)
specify_input_descriptors() (in module imagesplit.applications.split_files)
specify_output_descriptors() (in module imagesplit.applications.split_files)
split_file() (in module imagesplit.applications.split_files)
SubImage (class in imagesplit.image.combined_image)
SubImageDescriptor (class in imagesplit.utils.file_descriptor)
SubImageRanges (class in imagesplit.utils.file_descriptor)
T
TIFF_FORMAT (imagesplit.file.file_formats.FileFormats attribute)
TiffFileReader (class in imagesplit.file.tiff_file_reader)
to_condensed_format() (imagesplit.image.combined_image.Axis method)
to_dict() (imagesplit.utils.file_descriptor.SubImageDescriptor method)
to_global() (imagesplit.image.combined_image.CoordinateTransformer method)
to_local() (imagesplit.image.combined_image.CoordinateTransformer method)
to_other() (imagesplit.image.combined_image.CoordinateTransformer method)
to_rgb() (in module imagesplit.utils.utilities)
transform_coords() (imagesplit.image.image_wrapper.ImageWrapper method)
(imagesplit.image.image_wrapper.ImageWrapperBase method)
(imagesplit.image.image_wrapper.SmartImage method)
transform_sub_image() (imagesplit.image.image_wrapper.ImageWrapper method)
(imagesplit.image.image_wrapper.ImageWrapperBase method)
(imagesplit.image.image_wrapper.SmartImage method)
transform_to_other() (imagesplit.image.image_wrapper.SmartImage method)
transpose() (imagesplit.image.image_wrapper.ImageStorage method)
types (imagesplit.file.data_type.DataType attribute)
U
UCHAR_TYPE (imagesplit.file.data_type.DataType attribute)
ULONG_LONG_TYPE (imagesplit.file.data_type.DataType attribute)
ULONG_TYPE (imagesplit.file.data_type.DataType attribute)
USHORT_TYPE (imagesplit.file.data_type.DataType attribute)
utils (module)
V
version_from_pip() (in module imagesplit.utils.versioning)
version_from_versioneer() (in module imagesplit.utils.versioning)
versioneer (module)
VersioneerBadRootError
VersioneerConfig (class in imagesplit.utils.versioneer_version)
(class in versioneer)
versions_from_file() (in module versioneer)
versions_from_parentdir() (in module imagesplit.utils.versioneer_version)
(in module versioneer)
VOL_FORMAT (imagesplit.file.file_formats.FileFormats attribute)
VolFile (class in imagesplit.file.vol_reader)
W
write_descriptor_file() (in module imagesplit.utils.file_descriptor)
write_files() (in module imagesplit.applications.write_files)
write_image() (imagesplit.file.image_file_reader.BlockImageFileReader method)
(imagesplit.file.image_file_reader.ImageFileReader method)
(imagesplit.file.image_file_reader.LinearImageFileReader method)
(imagesplit.image.combined_image.CombinedImage method)
(imagesplit.image.combined_image.SubImage method)
write_json() (in module imagesplit.utils.json_reader)
write_line() (imagesplit.file.file_wrapper.FileStreamer method)
(imagesplit.file.image_file_reader.LinearImageFileReader method)
(imagesplit.file.metaio_reader.MetaIoFile method)
(imagesplit.file.vol_reader.VolFile method)
write_to_version_file() (in module versioneer)
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ImageSplit documentation
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