imagesplit.file.data_type module

Support multiple imaging data types

Author: Tom Doel Copyright UCL 2017

class imagesplit.file.data_type.DataType(template_name, byte_order_msb, compression=None, is_imagej=False)

Bases: object

Return required factory for image file formats

CHAR_TYPE = 'char'

DOUBLE_TYPE = 'double'

FLOAT_TYPE = 'float'

LONG_LONG_TYPE = 'longlong'

LONG_TYPE = 'long'

RGB_TYPE = 'rgb'

SHORT_TYPE = 'short'

UCHAR_TYPE = 'uchar'

ULONG_LONG_TYPE = 'ulonglong'

ULONG_TYPE = 'ulong'

USHORT_TYPE = 'ushort'

classmethod from_metaio(metaio_type_name, byte_order_msb)

Create a DataType from a MetaIO data type string

classmethod from_tiff(tiff_type_name, byte_order_msb)

Create a DataType from a TIFF data type string

classmethod from_vge(vge_type_name)

Create a DataType from a vge header data type string

get_is_imagej()

True if this datatype is an RGB format

get_is_rgb()

True if this datatype is an RGB format

get_numpy_format()

Create a numpy data format string for this data type

classmethod metaio_from_name(name)

Return the MetaIO name string from a DataType string

classmethod name_from_metaio(metaio_type_name)

Get a DataType string from a MetaIO data type string

classmethod name_from_tiff(tiff_type_name)

Get a DataType string from a TIFF data type string

classmethod name_from_vge(vge_type_name)

Get a DataType string from a vge data type string

types = {'char': <imagesplit.file.data_type.DataTypeTemplate object>, 'double': <imagesplit.file.data_type.DataTypeTemplate object>, 'float': <imagesplit.file.data_type.DataTypeTemplate object>, 'long': <imagesplit.file.data_type.DataTypeTemplate object>, 'longlong': <imagesplit.file.data_type.DataTypeTemplate object>, 'rgb': <imagesplit.file.data_type.DataTypeTemplate object>, 'short': <imagesplit.file.data_type.DataTypeTemplate object>, 'uchar': <imagesplit.file.data_type.DataTypeTemplate object>, 'ulong': <imagesplit.file.data_type.DataTypeTemplate object>, 'ulonglong': <imagesplit.file.data_type.DataTypeTemplate object>, 'ushort': <imagesplit.file.data_type.DataTypeTemplate object>}

class imagesplit.file.data_type.DataTypeTemplate(bytes_per_voxel, numpy_base=None, metaio_type=None, pil_type=None, vge_type=None, is_rgb=False)

Bases: object

Data format paramaters for standard data types